USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: STX12_HUMAN USC-OGP 2-DE database:  STX12_HUMAN STX12_HUMAN General information about the entry View entry in simple text format Entry name STX12_HUMAN Primary accession number Q86Y82 Secondary accession number(s) O95564 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Syntaxin-12;. Gene name Name=STX12 Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein PLATELET_4-5 {PLATELET 4-5} Homo sapiens (Human)   map experimental info   PLATELET_4-5 MAP LOCATIONS: SPOT OGP-0157: pI=4.79; Mw=30031 Cross-references UniProtKB/Swiss-Prot Q86Y82; STX12_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name STX12_HUMAN Primary accession number Q86Y82 Secondary accession number(s) B1AJQ7 O95564 Sequence was last modified on  June 1, 2003 (version 1) Annotations were last modified on  March 15, 2017 (version 138) Name and origin of the protein Description RecName: Full=Syntaxin-12; Gene name Name=STX12 Encoded on Name=STX12 Keywords 3D-structure; Acetylation; Coiled coil; Complete proteome; Endosome; Golgi apparatus; Membrane; Phosphoprotein; Polymorphism; Protein transport; Reference proteome; Transmembrane; Transmembrane helix; Transport. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL AF123769; AAP97248.1; -; mRNA EMBL AL035306; CAA22911.1; ALT_INIT; mRNA EMBL AK297585; BAG59973.1; -; mRNA EMBL AL020997; CAI20575.1; -; Genomic_DNA EMBL CH471059; EAX07738.1; -; Genomic_DNA EMBL CH471059; EAX07739.1; -; Genomic_DNA EMBL BC046999; AAH46999.1; -; mRNA CCDS CCDS310.1; -; . RefSeq NP_803173.1; NM_177424.2; . UniGene Hs.523855; -; . PDB 2DNX; NMR; -; A=18-134 PDBsum 2DNX; -; . ProteinModelPortal Q86Y82; -; . SMR Q86Y82; -; . BioGrid 117191; 93; . DIP DIP-44225N; -; . IntAct Q86Y82; 22; . MINT MINT-3036147; -; . STRING 9606.ENSP00000363054; -; . iPTMnet Q86Y82; -; . PhosphoSitePlus Q86Y82; -; . SwissPalm Q86Y82; -; . BioMuta STX12; -; . DMDM 47117211; -; . EPD Q86Y82; -; . MaxQB Q86Y82; -; . PaxDb Q86Y82; -; . PeptideAtlas Q86Y82; -; . PRIDE Q86Y82; -; . DNASU 23673; -; . Ensembl ENST00000373943; ENSP00000363054; ENSG00000117758; . GeneID 23673; -; . KEGG hsa:23673; -; . UCSC uc001bou.4; human; . CTD 23673; -; . GeneCards STX12; -; . HGNC HGNC:11430; STX12; . HPA HPA041038; -; . HPA HPA055300; -; . MIM 606892; gene; . neXtProt NX_Q86Y82; -; . OpenTargets ENSG00000117758; -; . PharmGKB PA36230; -; . eggNOG KOG0811; Eukaryota; . eggNOG COG5325; LUCA; . GeneTree ENSGT00450000040239; -; . HOGENOM HOG000188453; -; . HOVERGEN HBG053083; -; . InParanoid Q86Y82; -; . KO K13813; -; . OMA QMQSQEE; -; . OrthoDB EOG091G0HKZ; -; . PhylomeDB Q86Y82; -; . TreeFam TF315607; -; . ChiTaRS STX12; human; . EvolutionaryTrace Q86Y82; -; . GeneWiki STX12; -; . GenomeRNAi 23673; -; . PMAP-CutDB Q86Y82; -; . PRO PR:Q86Y82; -; . Proteomes UP000005640; Chromosome 1; . Bgee ENSG00000117758; -; . CleanEx HS_STX12; -; . ExpressionAtlas Q86Y82; baseline and differential; . Genevisible Q86Y82; HS; . GO GO:0012505; C:endomembrane system; IBA:GO_Central; . GO GO:0010008; C:endosome membrane; IEA:UniProtKB-SubCell; . GO GO:0070062; C:extracellular exosome; IDA:UniProtKB; . GO GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell; . GO GO:0016021; C:integral component of membrane; IBA:GO_Central; . GO GO:0045121; C:membrane raft; IDA:BHF-UCL; . GO GO:0045335; C:phagocytic vesicle; IDA:BHF-UCL; . GO GO:0000407; C:pre-autophagosomal structure; IMP:ParkinsonsUK-UCL; . GO GO:0031201; C:SNARE complex; IDA:UniProtKB; . GO GO:0031982; C:vesicle; IMP:ParkinsonsUK-UCL; . GO GO:0005484; F:SNAP receptor activity; IBA:GO_Central; . GO GO:0000149; F:SNARE binding; IBA:GO_Central; . GO GO:0000045; P:autophagosome assembly; IMP:ParkinsonsUK-UCL; . GO GO:0033344; P:cholesterol efflux; IDA:BHF-UCL; . GO GO:0006886; P:intracellular protein transport; IBA:GO_Central; . GO GO:0050821; P:protein stabilization; IDA:BHF-UCL; . GO GO:0048278; P:vesicle docking; IBA:GO_Central; . GO GO:0006906; P:vesicle fusion; IBA:GO_Central; . InterPro IPR010989; SNARE; . InterPro IPR006012; Syntaxin/epimorphin_CS; . InterPro IPR006011; Syntaxin_N; . InterPro IPR000727; T_SNARE_dom; . Pfam PF05739; SNARE; 1; . SMART SM00503; SynN; 1; . SMART SM00397; t_SNARE; 1; . SUPFAM SSF47661; SSF47661; 1; . PROSITE PS00914; SYNTAXIN; 1; . PROSITE PS50192; T_SNARE; 1; .

Gateways to other related servers

• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
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• World-2DPAGE Portal - A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
• ExPASy - The resources web server of the Swiss Institute of Bioinformatics

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